IL_4TUB_164

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_164 not in the Motif Atlas

Homologous match to IL_7RQB_110

Geometric discrepancy: 0.1343

The information below is about IL_7RQB_110

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_83162.5

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

4TUB|1|RA|U|2857
4TUB|1|RA|G|2858
4TUB|1|RA|U|2859
4TUB|1|RA|A|2860
4TUB|1|RA|A|2861
4TUB|1|RA|G|2862
*
4TUB|1|RA|U|2875
4TUB|1|RA|U|2876
4TUB|1|RA|G|2877
4TUB|1|RA|A|2878
4TUB|1|RA|G|2879

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RR

50S ribosomal protein L17

Chain RT

50S ribosomal protein L19