IL_4TUB_222
3D structure
- PDB id
- 4TUB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4TUB_222 not in the Motif Atlas
- Geometric match to IL_4V88_464
- Geometric discrepancy: 0.1059
- The information below is about IL_4V88_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4TUB|1|XA|G|1401
4TUB|1|XA|C|1402
4TUB|1|XA|C|1403
4TUB|1|XA|C|1404
*
4TUB|1|XA|G|1497
4TUB|1|XA|U|1498
4TUB|1|XA|A|1499
4TUB|1|XA|A|1500
4TUB|1|XA|C|1501
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XL
- 30S ribosomal protein S12
- Chain XV
- Transfer RNA; tRNA
- Chain XX
- messenger RNA
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: