IL_4TUB_292

3D structure

PDB id

4TUB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA-Thr bound to Codon ACC-C on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

4TUB|1|YA|C|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUB_292 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.2878

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

4TUB|1|YA|G|1526
4TUB|1|YA|G|1527
4TUB|1|YA|A|1528
4TUB|1|YA|A|1529
4TUB|1|YA|G|1530
*
4TUB|1|YA|U|1541
4TUB|1|YA|G|1542
4TUB|1|YA|A|1543
4TUB|1|YA|C|1544
4TUB|1|YA|A|1545
4TUB|1|YA|A|1545|||A
4TUB|1|YA|C|1546

Current chains

Chain YA

23S rRNA

Nearby chains