IL_4TUC_220

3D structure

PDB id

4TUC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4TUC_220 not in the Motif Atlas

Homologous match to IL_4LFB_055

Geometric discrepancy: 0.1314

The information below is about IL_4LFB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_53985.1

Basepair signature

cWW-tSH-tSH-L-R-cWW-cWW

Number of instances in this motif group

4

Unit IDs

4TUC|1|XA|C|1303
4TUC|1|XA|G|1304
4TUC|1|XA|G|1305
4TUC|1|XA|A|1306
4TUC|1|XA|U|1307
4TUC|1|XA|U|1308
*
4TUC|1|XA|A|1329
4TUC|1|XA|U|1330
4TUC|1|XA|G|1331
4TUC|1|XA|A|1332
4TUC|1|XA|A|1333
4TUC|1|XA|G|1334

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XM

30S ribosomal protein S13

Chain XU

30S ribosomal protein Thx