IL_4U24_271
3D structure
- PDB id
- 4U24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to dalfopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 4U24|1|DA|A|1143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U24_271 not in the Motif Atlas
- Geometric match to IL_5J7L_280
- Geometric discrepancy: 0.1322
- The information below is about IL_5J7L_280
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.5
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 5
Unit IDs
4U24|1|DA|U|1018
4U24|1|DA|U|1019
4U24|1|DA|A|1020
4U24|1|DA|A|1021
4U24|1|DA|G|1022
4U24|1|DA|U|1023
4U24|1|DA|G|1024
*
4U24|1|DA|C|1140
4U24|1|DA|U|1141
4U24|1|DA|A|1142
4U24|1|DA|A|1143
4U24|1|DA|A|1144
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain D4
- 50S ribosomal protein L36
- Chain DG
- 50S ribosomal protein L6
- Chain DJ
- 50S ribosomal protein L13
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