IL_4U3M_374

3D structure

PDB id

4U3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Anisomycin bound to the yeast 80S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCGU*AA

Length

6 nucleotides

Bulged bases

4U3M|1|6|C|114, 4U3M|1|6|G|115

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4U3M_374 not in the Motif Atlas

Homologous match to IL_4V88_392

Geometric discrepancy: 0.0645

The information below is about IL_4V88_392

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

4U3M|1|6|U|113
4U3M|1|6|C|114
4U3M|1|6|G|115
4U3M|1|6|U|116
*
4U3M|1|6|A|300
4U3M|1|6|A|301

Current chains

Chain 6

18S rRNA

Nearby chains

Chain c1

40S ribosomal protein S11-A

Chain s4

40S ribosomal protein S4-A

Chain s8

40S ribosomal protein S8-A