IL_4U67_014
3D structure
- PDB id
- 4U67 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 4U67|1|X|G|814, 4U67|1|X|G|818
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4U67_014 not in the Motif Atlas
- Homologous match to IL_7A0S_015
- Geometric discrepancy: 0.0977
- The information below is about IL_7A0S_015
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.2
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
4U67|1|X|G|687
4U67|1|X|A|688
4U67|1|X|A|689
4U67|1|X|A|690
4U67|1|X|C|691
*
4U67|1|X|G|812
4U67|1|X|A|813
4U67|1|X|G|814
4U67|1|X|A|815
4U67|1|X|U|816
4U67|1|X|A|817
4U67|1|X|G|818
4U67|1|X|C|819
Current chains
- Chain X
- 23s RNA
Nearby chains
- Chain C
- 50S ribosomal protein L4
- Chain I
- 50S ribosomal protein L15
Coloring options: