IL_4UG0_031

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCG*CCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UG0_031 not in the Motif Atlas

Geometric match to IL_4KR9_002

Geometric discrepancy: 0.1623

The information below is about IL_4KR9_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4UG0|1|L5|G|740
4UG0|1|L5|C|741
4UG0|1|L5|G|742
*
4UG0|1|L5|C|922
4UG0|1|L5|C|923
4UG0|1|L5|C|924

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LM

60S RIBOSOMAL PROTEIN L14

Chain LS

60S RIBOSOMAL PROTEIN L18A