IL_4UG0_073
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUGAG*CGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 4UG0|1|L5|A|2512, 4UG0|1|L5|A|2513
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_073 not in the Motif Atlas
- Homologous match to IL_8C3A_067
- Geometric discrepancy: 0.1323
- The information below is about IL_8C3A_067
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
4UG0|1|L5|C|2446
4UG0|1|L5|U|2447
4UG0|1|L5|G|2448
4UG0|1|L5|A|2449
4UG0|1|L5|G|2450
*
4UG0|1|L5|C|2509
4UG0|1|L5|G|2510
4UG0|1|L5|A|2511
4UG0|1|L5|A|2512
4UG0|1|L5|A|2513
4UG0|1|L5|G|2514
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LA
- 60S RIBOSOMAL PROTEIN L8
- Chain Lg
- 60S RIBOSOMAL PROTEIN L34
- Chain Lj
- 60S RIBOSOMAL PROTEIN L37
- Chain Ll
- 60S RIBOSOMAL PROTEIN L39
Coloring options: