IL_4UG0_102
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGAGGC*GCUC
- Length
- 11 nucleotides
- Bulged bases
- 4UG0|1|L5|G|4084, 4UG0|1|L5|G|4086, 4UG0|1|L5|G|4087, 4UG0|1|L5|C|4162, 4UG0|1|L5|U|4163
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_102 not in the Motif Atlas
- Homologous match to IL_5TBW_096
- Geometric discrepancy: 0.4015
- The information below is about IL_5TBW_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74114.1
- Basepair signature
- cWW-cWS-cWW-L-R
- Number of instances in this motif group
- 2
Unit IDs
4UG0|1|L5|G|4082
4UG0|1|L5|U|4083
4UG0|1|L5|G|4084
4UG0|1|L5|A|4085
4UG0|1|L5|G|4086
4UG0|1|L5|G|4087
4UG0|1|L5|C|4088
*
4UG0|1|L5|G|4161
4UG0|1|L5|C|4162
4UG0|1|L5|U|4163
4UG0|1|L5|C|4164
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LA
- 60S RIBOSOMAL PROTEIN L8
- Chain LG
- 60S RIBOSOMAL PROTEIN L7A
- Chain LX
- 60S RIBOSOMAL PROTEIN L23A
Coloring options: