IL_4UG0_108
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GACCU*AGC
- Length
- 8 nucleotides
- Bulged bases
- 4UG0|1|L5|C|4349
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_108 not in the Motif Atlas
- Geometric match to IL_6ZDU_001
- Geometric discrepancy: 0.3324
- The information below is about IL_6ZDU_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99358.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
4UG0|1|L5|G|4347
4UG0|1|L5|A|4348
4UG0|1|L5|C|4349
4UG0|1|L5|C|4350
4UG0|1|L5|U|4351
*
4UG0|1|L5|A|4363
4UG0|1|L5|G|4364
4UG0|1|L5|C|4365
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LL
- 60S RIBOSOMAL PROTEIN L13
- Chain LQ
- 60S RIBOSOMAL PROTEIN L18
- Chain La
- 60S RIBOSOMAL PROTEIN L27A
- Chain Lo
- 60S RIBOSOMAL PROTEIN L36A
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