IL_4UG0_167
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CACGC*GCGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_167 not in the Motif Atlas
- Geometric match to IL_1J2B_001
- Geometric discrepancy: 0.3947
- The information below is about IL_1J2B_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69301.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
4UG0|1|S2|C|317
4UG0|1|S2|A|318
4UG0|1|S2|C|319
4UG0|1|S2|G|320
4UG0|1|S2|C|321
*
4UG0|1|S2|G|330
4UG0|1|S2|C|331
4UG0|1|S2|G|332
4UG0|1|S2|G|333
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain LW
- 60S RIBOSOMAL PROTEIN L24
- Chain SE
- 40S RIBOSOMAL PROTEIN S4, X ISOFORM
- Chain SG
- 40S RIBOSOMAL PROTEIN S6
Coloring options: