IL_4UG0_235
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGCC*GGG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_235 not in the Motif Atlas
- Geometric match to IL_5TBW_064
- Geometric discrepancy: 0.266
- The information below is about IL_5TBW_064
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_15698.1
- Basepair signature
- cWW-tSH-cSH-cWW
- Number of instances in this motif group
- 9
Unit IDs
4UG0|1|L5|C|1474
4UG0|1|L5|G|1475
4UG0|1|L5|C|1476
4UG0|1|L5|C|1477
*
4UG0|1|L5|G|1488
4UG0|1|L5|G|1489
4UG0|1|L5|G|1490
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LL
- 60S RIBOSOMAL PROTEIN L13
- Chain La
- 60S RIBOSOMAL PROTEIN L27A
- Chain Lb
- 60S RIBOSOMAL PROTEIN L29
- Chain Lo
- 60S RIBOSOMAL PROTEIN L36A
Coloring options: