IL_4UG0_279
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 4UG0|1|S2|A|628, 4UG0|1|S2|U|630, 4UG0|1|S2|U|631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UG0_279 not in the Motif Atlas
- Homologous match to IL_8P9A_404
- Geometric discrepancy: 0.2488
- The information below is about IL_8P9A_404
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52042.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4UG0|1|S2|G|611
4UG0|1|S2|U|612
4UG0|1|S2|G|613
4UG0|1|S2|C|614
4UG0|1|S2|C|615
4UG0|1|S2|A|616
4UG0|1|S2|G|617
*
4UG0|1|S2|C|624
4UG0|1|S2|G|625
4UG0|1|S2|G|626
4UG0|1|S2|U|627
4UG0|1|S2|A|628
4UG0|1|S2|A|629
4UG0|1|S2|U|630
4UG0|1|S2|U|631
4UG0|1|S2|C|632
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SD
- 40S RIBOSOMAL PROTEIN S3
- Chain SX
- 40S RIBOSOMAL PROTEIN S23
- Chain Se
- 40S RIBOSOMAL PROTEIN S30
Coloring options: