IL_4UJE_046
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 4UJE|1|A2|G|1604, 4UJE|1|A2|A|1616, 4UJE|1|A2|A|1617, 4UJE|1|A2|U|1618
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_046 not in the Motif Atlas
- Geometric match to IL_7A0S_021
- Geometric discrepancy: 0.2105
- The information below is about IL_7A0S_021
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
4UJE|1|A2|G|1603
4UJE|1|A2|G|1604
4UJE|1|A2|G|1605
*
4UJE|1|A2|U|1615
4UJE|1|A2|A|1616
4UJE|1|A2|A|1617
4UJE|1|A2|U|1618
4UJE|1|A2|C|1619
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain CA
- 60S RIBOSOMAL PROTEIN L8
- Chain CN
- 60S RIBOSOMAL PROTEIN L15
- Chain CP
- 60S RIBOSOMAL PROTEIN L17
- Chain Cj
- 60S RIBOSOMAL PROTEIN L37
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