IL_4UJE_097
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UCAAAGU*AAUGAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_097 not in the Motif Atlas
- Homologous match to IL_5TBW_088
- Geometric discrepancy: 0.2309
- The information below is about IL_5TBW_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
4UJE|1|A2|U|3684
4UJE|1|A2|C|3685
4UJE|1|A2|A|3686
4UJE|1|A2|A|3687
4UJE|1|A2|A|3688
4UJE|1|A2|G|3689
4UJE|1|A2|U|3690
*
4UJE|1|A2|A|3701
4UJE|1|A2|A|3702
4UJE|1|A2|U|3703
4UJE|1|A2|G|3704
4UJE|1|A2|A|3705
4UJE|1|A2|A|3706
4UJE|1|A2|G|3707
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain AW
- Transfer RNA; tRNA
- Chain CA
- 60S RIBOSOMAL PROTEIN L8
- Chain Ci
- 60S RIBOSOMAL PROTEIN L36
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