IL_4UJE_161
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UCAAA*UGACGA
- Length
- 11 nucleotides
- Bulged bases
- 4UJE|1|B1|A|516
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_161 not in the Motif Atlas
- Homologous match to IL_4V88_386
- Geometric discrepancy: 0.5064
- The information below is about IL_4V88_386
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
4UJE|1|B1|U|36
4UJE|1|B1|C|37
4UJE|1|B1|A|38
4UJE|1|B1|A|39
4UJE|1|B1|A|40
*
4UJE|1|B1|U|514
4UJE|1|B1|G|515
4UJE|1|B1|A|516
4UJE|1|B1|C|517
4UJE|1|B1|G|518
4UJE|1|B1|A|519
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BE
- 40S RIBOSOMAL PROTEIN S4, Y ISOFORM 1
- Chain BJ
- 40S RIBOSOMAL PROTEIN S9
- Chain BY
- 40S RIBOSOMAL PROTEIN S24
Coloring options: