IL_4UJE_168
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GAUAAC*GCUAAUAC
- Length
- 14 nucleotides
- Bulged bases
- 4UJE|1|B1|U|172
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_168 not in the Motif Atlas
- Homologous match to IL_9PN5_152
- Geometric discrepancy: 0.548
- The information below is about IL_9PN5_152
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29461.1
- Basepair signature
- cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 2
Unit IDs
4UJE|1|B1|G|146
4UJE|1|B1|A|147
4UJE|1|B1|U|148
4UJE|1|B1|A|149
4UJE|1|B1|A|150
4UJE|1|B1|C|151
*
4UJE|1|B1|G|167
4UJE|1|B1|C|168
4UJE|1|B1|U|169
4UJE|1|B1|A|170
4UJE|1|B1|A|171
4UJE|1|B1|U|172
4UJE|1|B1|A|173
4UJE|1|B1|C|174
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BG
- 40S RIBOSOMAL PROTEIN S6
- Chain BY
- 40S RIBOSOMAL PROTEIN S24
Coloring options: