IL_4UJE_173
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 4UJE|1|B1|U|367, 4UJE|1|B1|U|368
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_173 not in the Motif Atlas
- Geometric match to IL_4ERD_001
- Geometric discrepancy: 0.3391
- The information below is about IL_4ERD_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44609.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 24
Unit IDs
4UJE|1|B1|U|366
4UJE|1|B1|U|367
4UJE|1|B1|U|368
4UJE|1|B1|C|369
4UJE|1|B1|G|370
4UJE|1|B1|A|371
*
4UJE|1|B1|U|393
4UJE|1|B1|G|394
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain BI
- 40S RIBOSOMAL PROTEIN S8
- Chain BL
- 40S RIBOSOMAL PROTEIN S11
- Chain CR
- 60S RIBOSOMAL PROTEIN L19
Coloring options: