IL_4UJE_192
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GAAAAAAUU*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_192 not in the Motif Atlas
- Homologous match to IL_4V88_425
- Geometric discrepancy: 0.3646
- The information below is about IL_4V88_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_53064.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
4UJE|1|B1|G|807
4UJE|1|B1|A|808
4UJE|1|B1|A|809
4UJE|1|B1|A|810
4UJE|1|B1|A|811
4UJE|1|B1|A|812
4UJE|1|B1|A|813
4UJE|1|B1|U|814
4UJE|1|B1|U|815
*
4UJE|1|B1|A|849
4UJE|1|B1|C|850
4UJE|1|B1|C|851
4UJE|1|B1|G|852
4UJE|1|B1|C|853
4UJE|1|B1|A|854
4UJE|1|B1|G|855
4UJE|1|B1|C|856
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BE
- 40S RIBOSOMAL PROTEIN S4, Y ISOFORM 1
- Chain BJ
- 40S RIBOSOMAL PROTEIN S9
- Chain BL
- 40S RIBOSOMAL PROTEIN S11
- Chain BW
- 40S RIBOSOMAL PROTEIN S15A
Coloring options: