IL_4UJE_202
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 4UJE|1|B1|C|1153, 4UJE|1|B1|U|1155, 4UJE|1|B1|G|1157
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_202 not in the Motif Atlas
- Homologous match to IL_4V88_437
- Geometric discrepancy: 0.1639
- The information below is about IL_4V88_437
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62898.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4UJE|1|B1|C|1091
4UJE|1|B1|G|1092
4UJE|1|B1|A|1093
*
4UJE|1|B1|U|1152
4UJE|1|B1|C|1153
4UJE|1|B1|U|1154
4UJE|1|B1|U|1155
4UJE|1|B1|U|1156
4UJE|1|B1|G|1157
4UJE|1|B1|G|1158
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BC
- 40S RIBOSOMAL PROTEIN S2
- Chain BL
- 40S RIBOSOMAL PROTEIN S11
- Chain BN
- 40S RIBOSOMAL PROTEIN S13
- Chain BW
- 40S RIBOSOMAL PROTEIN S15A
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