IL_4UJE_203
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- CGAU*GCAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_203 not in the Motif Atlas
- Geometric match to IL_4V88_438
- Geometric discrepancy: 0.2394
- The information below is about IL_4V88_438
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
4UJE|1|B1|C|1098
4UJE|1|B1|G|1099
4UJE|1|B1|A|1100
4UJE|1|B1|U|1101
*
4UJE|1|B1|G|1131
4UJE|1|B1|C|1132
4UJE|1|B1|A|1133
4UJE|1|B1|G|1134
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BA
- 40S RIBOSOMAL PROTEIN SA
- Chain BB
- 40S RIBOSOMAL PROTEIN S3A
- Chain BN
- 40S RIBOSOMAL PROTEIN S13
- Chain Ba
- 40S RIBOSOMAL PROTEIN S26
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