IL_4UJE_208
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GGAAG*CUUU
- Length
- 9 nucleotides
- Bulged bases
- 4UJE|1|B1|G|1207
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_208 not in the Motif Atlas
- Geometric match to IL_1D4R_001
- Geometric discrepancy: 0.2685
- The information below is about IL_1D4R_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
4UJE|1|B1|G|1206
4UJE|1|B1|G|1207
4UJE|1|B1|A|1208
4UJE|1|B1|A|1209
4UJE|1|B1|G|1210
*
4UJE|1|B1|C|1689
4UJE|1|B1|U|1690
4UJE|1|B1|U|1691
4UJE|1|B1|U|1692
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain AX
- Messenger RNA
- Chain BC
- 40S RIBOSOMAL PROTEIN S2
- Chain Ba
- 40S RIBOSOMAL PROTEIN S26
- Chain Bc
- 40S RIBOSOMAL PROTEIN S28
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