IL_4UJE_216
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GUGCAU*AUGC
- Length
- 10 nucleotides
- Bulged bases
- 4UJE|1|B1|C|1331
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_216 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.3451
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
4UJE|1|B1|G|1328
4UJE|1|B1|U|1329
4UJE|1|B1|G|1330
4UJE|1|B1|C|1331
4UJE|1|B1|A|1332
4UJE|1|B1|U|1333
*
4UJE|1|B1|A|1498
4UJE|1|B1|U|1499
4UJE|1|B1|G|1500
4UJE|1|B1|C|1501
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BD
- 40S RIBOSOMAL PROTEIN S3
- Chain BK
- 40S RIBOSOMAL PROTEIN S10
- Chain BU
- 40S RIBOSOMAL PROTEIN S20
- Chain Bd
- 40S RIBOSOMAL PROTEIN S29
Coloring options: