IL_4UJE_230
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GCCC*GUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_230 not in the Motif Atlas
- Geometric match to IL_4V88_464
- Geometric discrepancy: 0.2095
- The information below is about IL_4V88_464
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65718.1
- Basepair signature
- cWW-cSH-cWS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4UJE|1|B1|G|1702
4UJE|1|B1|C|1703
4UJE|1|B1|C|1704
4UJE|1|B1|C|1705
*
4UJE|1|B1|G|1829
4UJE|1|B1|U|1830
4UJE|1|B1|A|1831
4UJE|1|B1|A|1832
4UJE|1|B1|C|1833
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AV
- Transfer RNA; tRNA
- Chain AX
- Messenger RNA
- Chain Cn
- 60S RIBOSOMAL PROTEIN L41
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