IL_4UJE_237
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UGAG*CGAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_237 not in the Motif Atlas
- Homologous match to IL_4V88_471
- Geometric discrepancy: 0.1417
- The information below is about IL_4V88_471
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
4UJE|1|B1|U|1733
4UJE|1|B1|G|1734
4UJE|1|B1|A|1735
4UJE|1|B1|G|1736
*
4UJE|1|B1|C|1798
4UJE|1|B1|G|1799
4UJE|1|B1|A|1800
4UJE|1|B1|A|1801
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- 40S RIBOSOMAL PROTEIN S6
- Chain BI
- 40S RIBOSOMAL PROTEIN S8
- Chain CW
- 60S RIBOSOMAL PROTEIN L24
Coloring options: