IL_4UJE_238
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- CCUC*GACG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_238 not in the Motif Atlas
- Homologous match to IL_4V88_473
- Geometric discrepancy: 0.192
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
4UJE|1|B1|C|1739
4UJE|1|B1|C|1740
4UJE|1|B1|U|1741
4UJE|1|B1|C|1742
*
4UJE|1|B1|G|1792
4UJE|1|B1|A|1793
4UJE|1|B1|C|1794
4UJE|1|B1|G|1795
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- 40S RIBOSOMAL PROTEIN S6
- Chain BI
- 40S RIBOSOMAL PROTEIN S8
- Chain CW
- 60S RIBOSOMAL PROTEIN L24
Coloring options: