IL_4UJE_263
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- CCGACG*CGUCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_263 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.3127
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
4UJE|1|A2|C|1898
4UJE|1|A2|C|1899
4UJE|1|A2|G|1900
4UJE|1|A2|A|1901
4UJE|1|A2|C|1902
4UJE|1|A2|G|1903
*
4UJE|1|A2|C|2037
4UJE|1|A2|G|2038
4UJE|1|A2|U|2039
4UJE|1|A2|C|2040
4UJE|1|A2|G|2041
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain A4
- 5S ribosomal RNA; 5S rRNA
- Chain CF
- 60S RIBOSOMAL PROTEIN L7
- Chain CH
- 60S RIBOSOMAL PROTEIN L9
- Chain CM
- 60S RIBOSOMAL PROTEIN L14
- Chain CO
- 60S RIBOSOMAL PROTEIN L13A
- Chain CS
- 60S RIBOSOMAL PROTEIN L18A
- Chain Cf
- 60S RIBOSOMAL PROTEIN L35A
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