IL_4UJE_288
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 4UJE|1|A3|G|94
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4UJE_288 not in the Motif Atlas
- Homologous match to IL_8P9A_371
- Geometric discrepancy: 0.1718
- The information below is about IL_8P9A_371
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_76400.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
4UJE|1|A3|U|64
4UJE|1|A3|A|65
4UJE|1|A3|A|66
*
4UJE|1|A3|U|92
4UJE|1|A3|C|93
4UJE|1|A3|G|94
4UJE|1|A3|A|95
Current chains
- Chain A3
- 5.8S Ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain CY
- 60S RIBOSOMAL PROTEIN L26
- Chain Ch
- 60S RIBOSOMAL PROTEIN L35
- Chain Cj
- 60S RIBOSOMAL PROTEIN L37
Coloring options: