IL_4UY8_059

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

4UY8|1|A|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UY8_059 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.0935

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

4UY8|1|A|U|1468
4UY8|1|A|A|1469
4UY8|1|A|A|1470
4UY8|1|A|G|1471
*
4UY8|1|A|U|1520
4UY8|1|A|G|1521
4UY8|1|A|A|1522
4UY8|1|A|U|1523
4UY8|1|A|G|1524

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains