IL_4UY8_123

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCC*GCGG

Length

7 nucleotides

Bulged bases

4UY8|1|A|C|1732

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4UY8_123 not in the Motif Atlas

Geometric match to IL_7MLW_001

Geometric discrepancy: 0.2828

The information below is about IL_7MLW_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

4UY8|1|A|C|1726
4UY8|1|A|C|1727
4UY8|1|A|C|1728
*
4UY8|1|A|G|1731
4UY8|1|A|C|1732
4UY8|1|A|G|1733
4UY8|1|A|G|1734

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains