IL_4V19_054

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCCAGUAC*GGACAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86124.1

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

32

Unit IDs

4V19|1|A|C|1452
4V19|1|A|C|1453
4V19|1|A|C|1454
4V19|1|A|A|1455
4V19|1|A|G|1456
4V19|1|A|U|1457
4V19|1|A|A|1458
4V19|1|A|C|1459
*
4V19|1|A|G|1464
4V19|1|A|G|1465
4V19|1|A|A|1466
4V19|1|A|C|1467
4V19|1|A|A|1468
4V19|1|A|A|1469
4V19|1|A|G|1470

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain O

MITORIBOSOMAL PROTEIN UL14M, MRPL14