IL_4V49_010

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GACAAC*GCUAAUC

Length

13 nucleotides

Bulged bases

4V49|1|AA|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_010 not in the Motif Atlas

Homologous match to IL_4LFB_009

Geometric discrepancy: 0.1459

The information below is about IL_4LFB_009

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_12745.1

Basepair signature

cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

1

Unit IDs

4V49|1|AA|G|148
4V49|1|AA|A|149
4V49|1|AA|C|150
4V49|1|AA|A|151
4V49|1|AA|A|152
4V49|1|AA|C|153
*
4V49|1|AA|G|168
4V49|1|AA|C|169
4V49|1|AA|U|170
4V49|1|AA|A|171
4V49|1|AA|A|172
4V49|1|AA|U|173
4V49|1|AA|C|174

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AT

30S ribosomal protein S20