IL_4V49_046

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GUUGC*GGCACUC

Length

12 nucleotides

Bulged bases

4V49|1|AA|U|1125

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_046 not in the Motif Atlas

Homologous match to IL_4LFB_048

Geometric discrepancy: 0.2496

The information below is about IL_4LFB_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85222.1

Basepair signature

cWW-L-R-L-R-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

4V49|1|AA|G|1124
4V49|1|AA|U|1125
4V49|1|AA|U|1126
4V49|1|AA|G|1127
4V49|1|AA|C|1128
*
4V49|1|AA|G|1143
4V49|1|AA|G|1144
4V49|1|AA|C|1145
4V49|1|AA|A|1146
4V49|1|AA|C|1147
4V49|1|AA|U|1148
4V49|1|AA|C|1149

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10