IL_4V49_076
3D structure
- PDB id
- 4V49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 8.7 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 4V49|1|B0|G|814, 4V49|1|B0|G|818
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V49_076 not in the Motif Atlas
- Geometric match to IL_7A0S_015
- Geometric discrepancy: 0.3619
- The information below is about IL_7A0S_015
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_54041.2
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V49|1|B0|G|687
4V49|1|B0|A|688
4V49|1|B0|A|689
4V49|1|B0|A|690
4V49|1|B0|C|691
*
4V49|1|B0|G|812
4V49|1|B0|A|813
4V49|1|B0|G|814
4V49|1|B0|A|815
4V49|1|B0|U|816
4V49|1|B0|A|817
4V49|1|B0|G|818
4V49|1|B0|C|819
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BC
- 50S ribosomal protein L4
- Chain BJ
- 50S ribosomal protein L15
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