IL_4V49_148

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CG*CACG

Length

6 nucleotides

Bulged bases

4V49|1|B0|A|2551, 4V49|1|B0|C|2552

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_148 not in the Motif Atlas

Homologous match to IL_7A0S_090

Geometric discrepancy: 0.3155

The information below is about IL_7A0S_090

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_44609.1

Basepair signature

cWW-cWW

Number of instances in this motif group

28

Unit IDs

4V49|1|B0|C|2491
4V49|1|B0|G|2492
*
4V49|1|B0|C|2550
4V49|1|B0|A|2551
4V49|1|B0|C|2552
4V49|1|B0|G|2553

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain AW

Transfer RNA; tRNA

Chain BB

50S ribosomal protein L3

Chain BH

50S ribosomal protein L13