IL_4V49_151

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

UUGAG*CAAGAUGAG

Length

14 nucleotides

Bulged bases

4V49|1|B0|U|2759, 4V49|1|B0|G|2760

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_151 not in the Motif Atlas

Homologous match to IL_7RQB_102

Geometric discrepancy: 0.3185

The information below is about IL_7RQB_102

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.1

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

4V49|1|B0|U|2615
4V49|1|B0|U|2616
4V49|1|B0|G|2617
4V49|1|B0|A|2618
4V49|1|B0|G|2619
*
4V49|1|B0|C|2754
4V49|1|B0|A|2755
4V49|1|B0|A|2756
4V49|1|B0|G|2757
4V49|1|B0|A|2758
4V49|1|B0|U|2759
4V49|1|B0|G|2760
4V49|1|B0|A|2761
4V49|1|B0|G|2762

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BB

50S ribosomal protein L3

Chain BH

50S ribosomal protein L13