IL_4V49_154

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

UCUCC*GGUAG

Length

10 nucleotides

Bulged bases

4V49|1|B0|U|2668, 4V49|1|B0|C|2669

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_154 not in the Motif Atlas

Homologous match to IL_7RQB_105

Geometric discrepancy: 0.2625

The information below is about IL_7RQB_105

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_08296.3

Basepair signature

cWW-L-tHS-L-cWW

Number of instances in this motif group

4

Unit IDs

4V49|1|B0|U|2666
4V49|1|B0|C|2667
4V49|1|B0|U|2668
4V49|1|B0|C|2669
4V49|1|B0|C|2670
*
4V49|1|B0|G|2698
4V49|1|B0|G|2699
4V49|1|B0|U|2700
4V49|1|B0|A|2701
4V49|1|B0|G|2702

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BB

50S ribosomal protein L3

Chain BL

50S ribosomal protein L17

Chain BN

50S ribosomal protein L19