IL_4V49_160

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GACG*CUCU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V49_160 not in the Motif Atlas

Homologous match to IL_5J7L_327

Geometric discrepancy: 0.4499

The information below is about IL_5J7L_327

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_43644.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

2

Unit IDs

4V49|1|B0|G|3102
4V49|1|B0|A|3103
4V49|1|B0|C|3104
4V49|1|B0|G|3105
*
4V49|1|B0|C|3184
4V49|1|B0|U|3185
4V49|1|B0|C|3186
4V49|1|B0|U|3187

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BF

50S ribosomal protein L9