IL_4V49_163
3D structure
- PDB id
- 4V49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 8.7 Å
Loop
- Sequence
- GGAG*CGCCGGUGAAAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V49_163 not in the Motif Atlas
- Homologous match to IL_3U4M_003
- Geometric discrepancy: 0.2473
- The information below is about IL_3U4M_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
4V49|1|B0|G|3124
4V49|1|B0|G|3125
4V49|1|B0|A|3126
4V49|1|B0|G|3127
*
4V49|1|B0|C|3161
4V49|1|B0|G|3162
4V49|1|B0|C|3163
4V49|1|B0|C|3164
4V49|1|B0|G|3165
4V49|1|B0|G|3166
4V49|1|B0|U|3167
4V49|1|B0|G|3168
4V49|1|B0|A|3169
4V49|1|B0|A|3170
4V49|1|B0|A|3171
4V49|1|B0|U|3172
4V49|1|B0|A|3173
4V49|1|B0|C|3174
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain B5
- 50S ribosomal protein L1P
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