IL_4V4A_016

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GCAAU*AC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_016 not in the Motif Atlas

Geometric match to IL_4LFB_015

Geometric discrepancy: 0.1145

The information below is about IL_4LFB_015

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

4V4A|1|AA|G|371
4V4A|1|AA|C|372
4V4A|1|AA|A|373
4V4A|1|AA|A|374
4V4A|1|AA|U|375
*
4V4A|1|AA|A|389
4V4A|1|AA|C|390

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AP

30S ribosomal protein S16