IL_4V4A_068
3D structure
- PDB id
- 4V4A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 9.5 Å
Loop
- Sequence
- GGAACUG*CUCAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4A_068 not in the Motif Atlas
- Homologous match to IL_7A0S_006
- Geometric discrepancy: 0.2223
- The information below is about IL_7A0S_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
4V4A|1|B0|G|165
4V4A|1|B0|G|166
4V4A|1|B0|A|167
4V4A|1|B0|A|168
4V4A|1|B0|C|169
4V4A|1|B0|U|170
4V4A|1|B0|G|171
*
4V4A|1|B0|C|178
4V4A|1|B0|U|179
4V4A|1|B0|C|180
4V4A|1|B0|A|181
4V4A|1|B0|G|182
4V4A|1|B0|U|183
4V4A|1|B0|A|184
4V4A|1|B0|C|185
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BJ
- 50S ribosomal protein L15
- Chain BY
- 50S ribosomal protein L31
Coloring options: