IL_4V4A_084

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

CAU*ACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_084 not in the Motif Atlas

Homologous match to IL_7A0S_026

Geometric discrepancy: 0.2038

The information below is about IL_7A0S_026

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4V4A|1|B0|C|864
4V4A|1|B0|A|865
4V4A|1|B0|U|866
*
4V4A|1|B0|A|936
4V4A|1|B0|C|937
4V4A|1|B0|G|938

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BU

50S ribosomal protein L27

Chain BX

50S ribosomal protein L30