IL_4V4A_086

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GAG*CUCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_086 not in the Motif Atlas

Geometric match to IL_8VTW_096

Geometric discrepancy: 0.3031

The information below is about IL_8VTW_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

4V4A|1|B0|G|875
4V4A|1|B0|A|876
4V4A|1|B0|G|877
*
4V4A|1|B0|C|924
4V4A|1|B0|U|925
4V4A|1|B0|C|926
4V4A|1|B0|C|927

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B9

5S ribosomal RNA; 5S rRNA

Chain BK

50S ribosomal protein L16

Chain BU

50S ribosomal protein L27