IL_4V4A_100

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GUUG*CACC

Length

8 nucleotides

Bulged bases

4V4A|1|B0|U|1072

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_100 not in the Motif Atlas

Homologous match to IL_5J7L_285

Geometric discrepancy: 0.2246

The information below is about IL_5J7L_285

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

4V4A|1|B0|G|1070
4V4A|1|B0|U|1071
4V4A|1|B0|U|1072
4V4A|1|B0|G|1073
*
4V4A|1|B0|C|1087
4V4A|1|B0|A|1088
4V4A|1|B0|C|1089
4V4A|1|B0|C|1090

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BG

50S ribosomal protein L11

Chain BT

general stress protein Ctc