IL_4V4A_103
3D structure
- PDB id
- 4V4A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 9.5 Å
Loop
- Sequence
- CGGAGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 4V4A|1|B0|A|1224
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4A_103 not in the Motif Atlas
- Homologous match to IL_7RQB_047
- Geometric discrepancy: 0.2665
- The information below is about IL_7RQB_047
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 28
Unit IDs
4V4A|1|B0|C|1221
4V4A|1|B0|G|1222
4V4A|1|B0|G|1223
4V4A|1|B0|A|1224
4V4A|1|B0|G|1225
4V4A|1|B0|A|1226
4V4A|1|B0|A|1227
4V4A|1|B0|G|1228
*
4V4A|1|B0|U|1247
4V4A|1|B0|G|1248
4V4A|1|B0|G|1249
4V4A|1|B0|A|1250
4V4A|1|B0|G|1251
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BJ
- 50S ribosomal protein L15
- Chain BO
- 50S ribosomal protein L20
- Chain BQ
- 50S ribosomal protein L22
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