IL_4V4A_104

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

AUAC*GAGU

Length

8 nucleotides

Bulged bases

4V4A|1|B0|A|1233

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_104 not in the Motif Atlas

Geometric match to IL_3MEI_004

Geometric discrepancy: 0.3889

The information below is about IL_3MEI_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_51479.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

10

Unit IDs

4V4A|1|B0|A|1231
4V4A|1|B0|U|1232
4V4A|1|B0|A|1233
4V4A|1|B0|C|1234
*
4V4A|1|B0|G|1241
4V4A|1|B0|A|1242
4V4A|1|B0|G|1243
4V4A|1|B0|U|1244

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BO

50S ribosomal protein L20

Chain BP

50S ribosomal protein L21