IL_4V4A_107

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_107 not in the Motif Atlas

Homologous match to IL_7RQB_052

Geometric discrepancy: 0.3431

The information below is about IL_7RQB_052

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

4V4A|1|B0|C|1364
4V4A|1|B0|U|1365
4V4A|1|B0|A|1366
4V4A|1|B0|A|1367
4V4A|1|B0|G|1368
*
4V4A|1|B0|C|1389
4V4A|1|B0|G|1390
4V4A|1|B0|A|1391
4V4A|1|B0|U|1392
4V4A|1|B0|G|1393

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BA

50S ribosomal protein L2