IL_4V4A_112

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

CUAU*AAACG

Length

9 nucleotides

Bulged bases

4V4A|1|B0|C|1570

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4A_112 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.2782

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

4V4A|1|B0|C|1451
4V4A|1|B0|U|1452
4V4A|1|B0|A|1453
4V4A|1|B0|U|1454
*
4V4A|1|B0|A|1567
4V4A|1|B0|A|1568
4V4A|1|B0|A|1569
4V4A|1|B0|C|1570
4V4A|1|B0|G|1571

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains