IL_4V4G_177

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

CCGAAG*CGAGG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4G|1|CA|C|1430
4V4G|1|CA|C|1431
4V4G|1|CA|G|1432
4V4G|1|CA|A|1433
4V4G|1|CA|A|1434
4V4G|1|CA|G|1435
*
4V4G|1|CA|C|1466
4V4G|1|CA|G|1467
4V4G|1|CA|A|1468
4V4G|1|CA|G|1469
4V4G|1|CA|G|1470

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CT

30S ribosomal protein S20

Chain DB

Large subunit ribosomal RNA; LSU rRNA

Chain DL

50S ribosomal protein L14

Chain DQ

50S ribosomal protein L19